BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G03SP1|AL426259
(716 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig919 1251 0.0
>3x_Contig919
Length = 4576
Score = 1251 bits (616), Expect = 0.0
Identities = 678/716 (94%)
Strand = Plus / Minus
Query: 1 caatagcaagagagaggatgatraggataagggatcagcccctgctttaaccaaacagat 60
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 4113 caatagcaagagagaggatgataaggataaggaatcagcccctgctttaaccaaacagat 4054
Query: 61 tgccatttctccgtcaagttgttcacaacagtcatatcttttragtttcttcacaaraga 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 4053 tgccatttctccgtcaagttgttcacaacagtcatatcttttaagtttcttcacaaaaga 3994
Query: 121 atcatgcctagrtttctacratrattkattacagagatatgctgaratcararrcgcagt 180
||||||||||| ||||||| || ||| |||||||||||||||||| |||| | ||||||
Sbjct: 3993 atcatgcctagatttctacaataatttattacagagatatgctgaaatcaaaaacgcagt 3934
Query: 181 aaagtctgaccagttagcaatgrrcttcgttaagattcaagacgatgagggatgggtggc 240
|||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||
Sbjct: 3933 aaagtctgaccagttagcaatgaacttcgttaagattcaagacgatgaggaatggatggc 3874
Query: 241 caacttgargatgaacgttatttctttgggtgccactagaagcctttatgtcgagtttgc 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3873 caacttgaagatgaacgttatttctttgggtgccactagaagcctttatgtcgagtttgc 3814
Query: 301 ggrcgatagcgttacttcagacactatttgggacacactcccgtttttgrrgrattcagg 360
|| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 3813 ggacgatagcgttacttcagacactatttgggacacactcccgtttttgaagaattcagg 3754
Query: 361 tgaatgtgttgttattgatgtagatgtggttactactgatgagaggggaaarrrcttcgg 420
| ||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 3753 taaatatgttgttattgatgtagatgtggttactactgatgaaaggagaaaaaacttcgg 3694
Query: 421 attacrttattgtttactccattttctctcggtaacaatggctttagragttaaagrgct 480
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 3693 attacattattgtttactccattttctctcggtaacaatggctttagaagttaaagaact 3634
Query: 481 gttagagaccggagatgaagcagtatcaagagtgtcattcgtgacacctgccaattcggc 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3633 gttagaaaccggagatgaagcagtatcaagagtgtcattcgtgacacctgccaattcggc 3574
Query: 541 agataaggggrtgagaagaagaagaagcagcgccatttcgttaaagcaagaagcaagtcc 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3573 agataaggaaatgagaagaagaagaagcagcgccatttcgttaaagcaagaagcaagtcc 3514
Query: 601 tcaaatgttctcgacggattctcgctctcgctctcgttctagtaatgtgtcgttgcctct 660
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3513 tcaaatgttctcgacggattcacgctctcgctctcgttctagtaatgtgtcgttgcctct 3454
Query: 661 ttcggaacaagtcagcacagcatctacagatatcagtacgccgatctatgargaat 716
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3453 ttcggaacaagtcagcacagcatctacagatatcagtacgccgatctatgaagaat 3398
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3828
Number of Sequences: 1807
Number of extensions: 3828
Number of successful extensions: 281
Number of sequences better than 1.0e-20: 1
length of query: 716
length of database: 10,358,551
effective HSP length: 16
effective length of query: 700
effective length of database: 10,329,639
effective search space: 7230747300
effective search space used: 7230747300
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)